#include <vtkPhilipsRECReader.h>
Inheritance diagram for vtkPhilipsRECReader:
vtkPhilipsRECReader is a source object that reads Philips PAR/REC image files. The floating point value and display value of the data read in may be calculated using the following formulas taken from the PAR file:
# === PIXEL VALUES ============================================================= # PV = pixel value in REC file, FP = floating point value, DV = displayed value on console # RS = rescale slope, RI = rescale intercept, SS = scale slope # DV = PV * RS + RI FP = DV / (RS * SS)
Definition at line 57 of file vtkPhilipsRECReader.h.
Public Member Functions | |
| vtkTypeRevisionMacro (vtkPhilipsRECReader, vtkMedicalImageReader2) | |
| virtual void | PrintSelf (ostream &os, vtkIndent indent) |
| virtual int | CanReadFile (const char *fname) |
| void * | GetPARFileParameters () |
| virtual int | GetNumberOfImageBlocks () |
| int | GetSliceIndex (int index) |
| int | GetNumberOfImageTypes () |
| int | GetNumberOfScanningSequences () |
| float | GetRescaleSlope (int image_type, int scanning_sequence) |
| float | GetRescaleIntercept (int image_type, int scanning_sequence) |
| float | GetScaleSlope (int image_type, int scanning_sequence) |
| int | GetMaximumNumberOfGradientOrientations () |
| float | GetDiffusionOrientationAP (int diffusion_num) |
| float | GetDiffusionOrientationFH (int diffusion_num) |
| float | GetDiffusionOrientationRL (int diffusion_num) |
| float | GetDiffusionBValue (int diffusion_num) |
| virtual void | ComputeInternalFileName (int slice) |
| virtual const char * | GetFileExtensions () |
| virtual const char * | GetDescriptiveName () |
| virtual void | SetSortByBlock (int) |
| virtual int | GetSortByBlock () |
| virtual void | SortByBlockOn () |
| virtual void | SortByBlockOff () |
| virtual int * | GetImageTypes () |
| virtual void | GetImageTypes (int data[8]) |
| virtual int * | GetScanningSequences () |
| virtual void | GetScanningSequences (int data[8]) |
Static Public Member Functions | |
| static vtkPhilipsRECReader * | New () |
Protected Member Functions | |
| vtkPhilipsRECReader () | |
| ~vtkPhilipsRECReader () | |
| virtual void | ExecuteInformation () |
| virtual void | ExecuteData (vtkDataObject *out) |
Protected Attributes | |
| par_parameter * | PARFileParameters |
| int | SortByBlock |
| int | ImageTypes [PAR_DEFAULT_IMAGE_TYPES_SIZE] |
| int | ScanningSequences [PAR_DEFAULT_SCAN_SEQUENCE_SIZE] |
| vtkPhilipsRECReaderSliceIndexType * | SliceIndex |
| vtkPhilipsRECReaderRescaleValuesType * | RescaleValues |
| vtkPhilipsRECReaderDiffusionGradientOrientation * | DiffusionGradientOrientations |
| vtkPhilipsRECReaderDiffusionBValue * | DiffusionBValues |
| vtkPhilipsRECReader::vtkPhilipsRECReader | ( | ) | [protected] |
| vtkPhilipsRECReader::~vtkPhilipsRECReader | ( | ) | [protected] |
| static vtkPhilipsRECReader* vtkPhilipsRECReader::New | ( | ) | [static] |
Reimplemented from vtkMedicalImageReader2.
| vtkPhilipsRECReader::vtkTypeRevisionMacro | ( | vtkPhilipsRECReader | , | |
| vtkMedicalImageReader2 | ||||
| ) |
| virtual void vtkPhilipsRECReader::PrintSelf | ( | ostream & | os, | |
| vtkIndent | indent | |||
| ) | [virtual] |
Reimplemented from vtkMedicalImageReader2.
| virtual int vtkPhilipsRECReader::CanReadFile | ( | const char * | fname | ) | [virtual] |
| virtual const char* vtkPhilipsRECReader::GetFileExtensions | ( | ) | [inline, virtual] |
Valid extentsions
Reimplemented from vtkImageReader2.
Definition at line 68 of file vtkPhilipsRECReader.h.
| virtual const char* vtkPhilipsRECReader::GetDescriptiveName | ( | ) | [inline, virtual] |
A descriptive name for this format
Reimplemented from vtkImageReader2.
Definition at line 76 of file vtkPhilipsRECReader.h.
| void* vtkPhilipsRECReader::GetPARFileParameters | ( | ) | [inline] |
Get the PAR file parameter struct (set only if CanReadFile has been called or an Update function).
Definition at line 84 of file vtkPhilipsRECReader.h.
| virtual void vtkPhilipsRECReader::SetSortByBlock | ( | int | ) | [virtual] |
Set/Get whether to sort multiple images by image blocks or by slices (default).
| virtual int vtkPhilipsRECReader::GetSortByBlock | ( | ) | [virtual] |
Set/Get whether to sort multiple images by image blocks or by slices (default).
| virtual void vtkPhilipsRECReader::SortByBlockOn | ( | ) | [virtual] |
Set/Get whether to sort multiple images by image blocks or by slices (default).
| virtual void vtkPhilipsRECReader::SortByBlockOff | ( | ) | [virtual] |
Set/Get whether to sort multiple images by image blocks or by slices (default).
| virtual int vtkPhilipsRECReader::GetNumberOfImageBlocks | ( | ) | [inline, virtual] |
Returns the number of image blocks stored in the REC file.
Definition at line 96 of file vtkPhilipsRECReader.h.
| int vtkPhilipsRECReader::GetSliceIndex | ( | int | index | ) |
Returns the slice index based on the desired arrangement (see SetSortByBlockOn/Off).
| int vtkPhilipsRECReader::GetNumberOfImageTypes | ( | ) | [inline] |
Returns the number of image types stored in the REC file.
Definition at line 104 of file vtkPhilipsRECReader.h.
| virtual int* vtkPhilipsRECReader::GetImageTypes | ( | ) | [virtual] |
Returns the image types array. Non-negative values in the array represent valid image types that exist in the REC file. Use GetNumberOfImageTypes() to determine the total number of image types in the REC file.
| virtual void vtkPhilipsRECReader::GetImageTypes | ( | int | data[8] | ) | [virtual] |
Returns the image types array. Non-negative values in the array represent valid image types that exist in the REC file. Use GetNumberOfImageTypes() to determine the total number of image types in the REC file.
| int vtkPhilipsRECReader::GetNumberOfScanningSequences | ( | ) | [inline] |
Returns the number of scanning sequences stored in the REC file.
Definition at line 116 of file vtkPhilipsRECReader.h.
| virtual int* vtkPhilipsRECReader::GetScanningSequences | ( | ) | [virtual] |
Returns the scanning sequences array. Non-negative values in the array represent valid image types that exist in the REC file. Use GetNumberOfScanningSequences() to determine the total number of scanning sequences in the REC file.
| virtual void vtkPhilipsRECReader::GetScanningSequences | ( | int | data[8] | ) | [virtual] |
Returns the scanning sequences array. Non-negative values in the array represent valid image types that exist in the REC file. Use GetNumberOfScanningSequences() to determine the total number of scanning sequences in the REC file.
| float vtkPhilipsRECReader::GetRescaleSlope | ( | int | image_type, | |
| int | scanning_sequence | |||
| ) |
Returns the rescale slope given the image type and scanning sequence Non-negative valid image types and scanning sequences are stored in the image_types par_parameter and scanning_sequences par_parameter.
| float vtkPhilipsRECReader::GetRescaleIntercept | ( | int | image_type, | |
| int | scanning_sequence | |||
| ) |
Returns the rescale intercept given the image type and scanning sequence Non-negative valid image types and scanning sequences are stored in the image_types par_parameter and scanning_sequences par_parameter.
| float vtkPhilipsRECReader::GetScaleSlope | ( | int | image_type, | |
| int | scanning_sequence | |||
| ) |
Returns the scale slope given given the image type and scanning sequence Non-negative valid image types and scanning sequences are stored in the image_types par_parameter and scanning_sequences par_parameter.
| int vtkPhilipsRECReader::GetMaximumNumberOfGradientOrientations | ( | ) | [inline] |
Returns the maximum number of gradient orientation images stored in the REC file (max_num_grad_orient value from par_parameter).
Definition at line 148 of file vtkPhilipsRECReader.h.
| float vtkPhilipsRECReader::GetDiffusionOrientationAP | ( | int | diffusion_num | ) |
Returns the diffusion orientation in the ap direction for the diffusion direction at diffusion_num. The number of diffusion directions is determined using the max_num_grad_orient value in par_parameter.
| float vtkPhilipsRECReader::GetDiffusionOrientationFH | ( | int | diffusion_num | ) |
Returns the diffusion orientation in the fh direction for the diffusion direction at diffusion_num. The number of diffusion directions is determined using the max_num_grad_orient value in par_parameter.
| float vtkPhilipsRECReader::GetDiffusionOrientationRL | ( | int | diffusion_num | ) |
Returns the diffusion orientation in the rl direction for the diffusion direction at diffusion_num. The number of diffusion directions is determined using the max_num_grad_orient value in par_parameter.
| float vtkPhilipsRECReader::GetDiffusionBValue | ( | int | diffusion_num | ) |
Returns the diffusion B value for the diffusion direction at diffusion_num. The number of diffusion directions is determined using the max_num_grad_orient value in par_parameter.
| virtual void vtkPhilipsRECReader::ComputeInternalFileName | ( | int | slice | ) | [virtual] |
Compute the internal file name.
Reimplemented from vtkImageReader2.
| virtual void vtkPhilipsRECReader::ExecuteInformation | ( | ) | [protected, virtual] |
Reimplemented from vtkImageReader2.
| virtual void vtkPhilipsRECReader::ExecuteData | ( | vtkDataObject * | out | ) | [protected, virtual] |
Reimplemented from vtkImageReader2.
par_parameter* vtkPhilipsRECReader::PARFileParameters [protected] |
Definition at line 184 of file vtkPhilipsRECReader.h.
int vtkPhilipsRECReader::SortByBlock [protected] |
Definition at line 185 of file vtkPhilipsRECReader.h.
int vtkPhilipsRECReader::ImageTypes[PAR_DEFAULT_IMAGE_TYPES_SIZE] [protected] |
Definition at line 186 of file vtkPhilipsRECReader.h.
int vtkPhilipsRECReader::ScanningSequences[PAR_DEFAULT_SCAN_SEQUENCE_SIZE] [protected] |
Definition at line 187 of file vtkPhilipsRECReader.h.
vtkPhilipsRECReaderSliceIndexType* vtkPhilipsRECReader::SliceIndex [protected] |
Definition at line 188 of file vtkPhilipsRECReader.h.
vtkPhilipsRECReaderRescaleValuesType* vtkPhilipsRECReader::RescaleValues [protected] |
Definition at line 189 of file vtkPhilipsRECReader.h.
vtkPhilipsRECReaderDiffusionGradientOrientation* vtkPhilipsRECReader::DiffusionGradientOrientations [protected] |
Definition at line 190 of file vtkPhilipsRECReader.h.
vtkPhilipsRECReaderDiffusionBValue* vtkPhilipsRECReader::DiffusionBValues [protected] |
Definition at line 191 of file vtkPhilipsRECReader.h.
1.4.7