#include <vtkBrukerFIDReader.h>
Inheritance diagram for vtkBrukerFIDReader:


vtkBrukerFIDReader is a source object that reads Bruker MRI fid files.
Definition at line 64 of file vtkBrukerFIDReader.h.
| vtkBrukerFIDReader::vtkBrukerFIDReader | ( | ) | [protected] |
| vtkBrukerFIDReader::~vtkBrukerFIDReader | ( | ) | [protected] |
| static vtkBrukerFIDReader* vtkBrukerFIDReader::New | ( | ) | [static] |
Reimplemented from vtkMedicalImageReader2.
| vtkBrukerFIDReader::vtkTypeRevisionMacro | ( | vtkBrukerFIDReader | , | |
| vtkMedicalImageReader2 | ||||
| ) |
| virtual void vtkBrukerFIDReader::PrintSelf | ( | ostream & | os, | |
| vtkIndent | indent | |||
| ) | [virtual] |
Reimplemented from vtkMedicalImageReader2.
| virtual int vtkBrukerFIDReader::CanReadFile | ( | const char * | fname | ) | [virtual] |
| virtual void vtkBrukerFIDReader::SeekFile | ( | int | x, | |
| int | echo, | |||
| int | slice, | |||
| int | y, | |||
| int | z, | |||
| int | nr | |||
| ) | [virtual] |
parameters listed.
| virtual const char* vtkBrukerFIDReader::GetDescriptiveName | ( | ) | [inline, virtual] |
A descriptive name for this format
Reimplemented from vtkImageReader2.
Definition at line 78 of file vtkBrukerFIDReader.h.
| virtual int* vtkBrukerFIDReader::GetRealDataExtent | ( | ) | [virtual] |
Get the actual extent of the Bruker fid file.
| virtual void vtkBrukerFIDReader::GetRealDataExtent | ( | int | data[12] | ) | [virtual] |
Get the actual extent of the Bruker fid file.
| virtual int* vtkBrukerFIDReader::GetRealModifiedDataExtent | ( | ) | [virtual] |
Get the modified actual extent of the Bruker fid file.
| virtual void vtkBrukerFIDReader::GetRealModifiedDataExtent | ( | int | data[12] | ) | [virtual] |
Get the modified actual extent of the Bruker fid file.
| virtual int* vtkBrukerFIDReader::GetRealDataIncrements | ( | ) | [virtual] |
Get the actual data increments of the Bruker fid file.
| virtual void vtkBrukerFIDReader::GetRealDataIncrements | ( | int | data[7] | ) | [virtual] |
Get the actual data increments of the Bruker fid file.
| virtual int* vtkBrukerFIDReader::GetRealModifiedDataIncrements | ( | ) | [virtual] |
Get the modified actual data increments of the Bruker fid file.
| virtual void vtkBrukerFIDReader::GetRealModifiedDataIncrements | ( | int | data[7] | ) | [virtual] |
Get the modified actual data increments of the Bruker fid file.
| virtual int vtkBrukerFIDReader::GetACQ_dim | ( | ) | [virtual] |
Get the number of acquisition dimensions.
| virtual int* vtkBrukerFIDReader::GetACQ_size | ( | ) | [virtual] |
Get the sizes of each acquisition dimension.
| virtual void vtkBrukerFIDReader::GetACQ_size | ( | int & | , | |
| int & | , | |||
| int & | ||||
| ) | [virtual] |
Get the sizes of each acquisition dimension.
| virtual void vtkBrukerFIDReader::GetACQ_size | ( | int | [3] | ) | [virtual] |
Get the sizes of each acquisition dimension.
| virtual double* vtkBrukerFIDReader::GetACQ_fov | ( | ) | [virtual] |
Get the acquisition field of view from the acqp file.
| virtual void vtkBrukerFIDReader::GetACQ_fov | ( | double & | , | |
| double & | , | |||
| double & | ||||
| ) | [virtual] |
Get the acquisition field of view from the acqp file.
| virtual void vtkBrukerFIDReader::GetACQ_fov | ( | double | [3] | ) | [virtual] |
Get the acquisition field of view from the acqp file.
| virtual int vtkBrukerFIDReader::GetNumSlices | ( | ) | [virtual] |
Get the number of slices.
| virtual int vtkBrukerFIDReader::GetNechoes | ( | ) | [virtual] |
Get the number of echos per slice.
| virtual int vtkBrukerFIDReader::GetACQ_n_echo_images | ( | ) | [virtual] |
Get the number of echo images(if exists).
| virtual int vtkBrukerFIDReader::GetNumRepetitions | ( | ) | [virtual] |
Get the number of experiment repetitions.
| virtual int vtkBrukerFIDReader::GetACQ_echo_timeArraySize | ( | ) | [virtual] |
Get the ACQ_echo_time array size.
| double* vtkBrukerFIDReader::GetACQ_echo_time | ( | ) | [inline] |
Get the ACQ_echo_time array.
Definition at line 146 of file vtkBrukerFIDReader.h.
| virtual int vtkBrukerFIDReader::GetACQ_repetition_timeArraySize | ( | ) | [virtual] |
Get the ACQ_repetition_time array size.
| double* vtkBrukerFIDReader::GetACQ_repetition_time | ( | ) | [inline] |
Get the ACQ_repetition_time array.
Definition at line 154 of file vtkBrukerFIDReader.h.
| virtual double vtkBrukerFIDReader::GetACQ_slice_thick | ( | ) | [virtual] |
Get the ACQ_slice_thick value in mm.
| virtual int vtkBrukerFIDReader::GetACQ_phase_factor | ( | ) | [virtual] |
Get the ACQ_phase_factor value.
| virtual int* vtkBrukerFIDReader::GetEchoPosition | ( | ) | [virtual] |
Get the xyz coordinates of the echo position in the fid.
| virtual void vtkBrukerFIDReader::GetEchoPosition | ( | int & | , | |
| int & | , | |||
| int & | ||||
| ) | [virtual] |
Get the xyz coordinates of the echo position in the fid.
| virtual void vtkBrukerFIDReader::GetEchoPosition | ( | int | [3] | ) | [virtual] |
Get the xyz coordinates of the echo position in the fid.
| virtual char* vtkBrukerFIDReader::GetNucleus | ( | ) | [virtual] |
Get the Nucleus type.
| virtual void vtkBrukerFIDReader::GetNucleus | ( | char | data[9] | ) | [virtual] |
Get the Nucleus type.
| virtual double vtkBrukerFIDReader::GetBaseFrequency | ( | ) | [virtual] |
Get the base precession frequency in Hz.
| virtual int* vtkBrukerFIDReader::GetACQ_grad_matrixArraySize | ( | ) | [virtual] |
Get the ACQ_grad_matrixArraySize array size.
| virtual void vtkBrukerFIDReader::GetACQ_grad_matrixArraySize | ( | int & | , | |
| int & | , | |||
| int & | ||||
| ) | [virtual] |
Get the ACQ_grad_matrixArraySize array size.
| virtual void vtkBrukerFIDReader::GetACQ_grad_matrixArraySize | ( | int | [3] | ) | [virtual] |
Get the ACQ_grad_matrixArraySize array size.
| double* vtkBrukerFIDReader::GetACQ_grad_matrix | ( | ) | [inline] |
Get the ACQ_grad_matrix array.
Definition at line 188 of file vtkBrukerFIDReader.h.
| virtual int vtkBrukerFIDReader::GetSliceOrderArraySize | ( | ) | [virtual] |
Get the SliceOrderArraySize array size.
| double* vtkBrukerFIDReader::GetACQ_read_offset | ( | ) | [inline] |
Get the ACQ_read_offset array.
Definition at line 196 of file vtkBrukerFIDReader.h.
| virtual int vtkBrukerFIDReader::GetACQ_read_offsetArraySize | ( | ) | [virtual] |
Get the ACQ_read_offsetArraySize array size.
| double* vtkBrukerFIDReader::GetACQ_phase1_offset | ( | ) | [inline] |
Get the ACQ_phase1_offset array.
Definition at line 204 of file vtkBrukerFIDReader.h.
| virtual int vtkBrukerFIDReader::GetACQ_phase1_offsetArraySize | ( | ) | [virtual] |
Get the ACQ_phase1_offsetArraySize array size.
| double* vtkBrukerFIDReader::GetACQ_phase2_offset | ( | ) | [inline] |
Get the ACQ_phase2_offset array.
Definition at line 212 of file vtkBrukerFIDReader.h.
| virtual int vtkBrukerFIDReader::GetACQ_phase2_offsetArraySize | ( | ) | [virtual] |
Get the ACQ_phase2_offsetArraySize array size.
| int* vtkBrukerFIDReader::GetSliceOrder | ( | ) | [inline] |
Get the SliceOrder array.
Definition at line 220 of file vtkBrukerFIDReader.h.
| virtual void vtkBrukerFIDReader::SetSortSlices | ( | int | ) | [virtual] |
Set/Get whether to sort slices (default is On).
| virtual int vtkBrukerFIDReader::GetSortSlices | ( | ) | [virtual] |
Set/Get whether to sort slices (default is On).
| virtual void vtkBrukerFIDReader::SortSlicesOn | ( | ) | [virtual] |
Set/Get whether to sort slices (default is On).
| virtual void vtkBrukerFIDReader::SortSlicesOff | ( | ) | [virtual] |
Set/Get whether to sort slices (default is On).
| virtual int vtkBrukerFIDReader::GetYOrderArraySize | ( | ) | [virtual] |
Get the YOrderArraySize array size.
| int* vtkBrukerFIDReader::GetYOrder | ( | ) | [inline] |
Get the YOrder array.
Definition at line 235 of file vtkBrukerFIDReader.h.
| virtual void vtkBrukerFIDReader::SetSortYAxis | ( | int | ) | [virtual] |
Set/Get whether to sort y axis (default is On).
| virtual int vtkBrukerFIDReader::GetSortYAxis | ( | ) | [virtual] |
Set/Get whether to sort y axis (default is On).
| virtual void vtkBrukerFIDReader::SortYAxisOn | ( | ) | [virtual] |
Set/Get whether to sort y axis (default is On).
| virtual void vtkBrukerFIDReader::SortYAxisOff | ( | ) | [virtual] |
Set/Get whether to sort y axis (default is On).
| virtual int vtkBrukerFIDReader::GetZOrderArraySize | ( | ) | [virtual] |
Get the ZOrderArraySize array size.
| int* vtkBrukerFIDReader::GetZOrder | ( | ) | [inline] |
Get the ZOrder array.
Definition at line 250 of file vtkBrukerFIDReader.h.
| virtual void vtkBrukerFIDReader::SetSortZAxis | ( | int | ) | [virtual] |
Set/Get whether to sort z axis (default is On).
| virtual int vtkBrukerFIDReader::GetSortZAxis | ( | ) | [virtual] |
Set/Get whether to sort z axis (default is On).
| virtual void vtkBrukerFIDReader::SortZAxisOn | ( | ) | [virtual] |
Set/Get whether to sort z axis (default is On).
| virtual void vtkBrukerFIDReader::SortZAxisOff | ( | ) | [virtual] |
Set/Get whether to sort z axis (default is On).
| virtual void vtkBrukerFIDReader::SetReverseAlternateRows | ( | int | ) | [virtual] |
Set/Get whether to reverse row values for every other echo (default is Off).
| virtual int vtkBrukerFIDReader::GetReverseAlternateRows | ( | ) | [virtual] |
Set/Get whether to reverse row values for every other echo (default is Off).
| virtual void vtkBrukerFIDReader::ReverseAlternateRowsOn | ( | ) | [virtual] |
Set/Get whether to reverse row values for every other echo (default is Off).
| virtual void vtkBrukerFIDReader::ReverseAlternateRowsOff | ( | ) | [virtual] |
Set/Get whether to reverse row values for every other echo (default is Off).
| virtual void vtkBrukerFIDReader::SetReverseAlternateColumns | ( | int | ) | [virtual] |
Set/Get whether to reverse column values for every other echo (default is Off).
| virtual int vtkBrukerFIDReader::GetReverseAlternateColumns | ( | ) | [virtual] |
Set/Get whether to reverse column values for every other echo (default is Off).
| virtual void vtkBrukerFIDReader::ReverseAlternateColumnsOn | ( | ) | [virtual] |
Set/Get whether to reverse column values for every other echo (default is Off).
| virtual void vtkBrukerFIDReader::ReverseAlternateColumnsOff | ( | ) | [virtual] |
Set/Get whether to reverse column values for every other echo (default is Off).
| virtual void vtkBrukerFIDReader::ExecuteInformation | ( | ) | [protected, virtual] |
Reimplemented from vtkImageReader2.
| virtual void vtkBrukerFIDReader::ExecuteData | ( | vtkDataObject * | out | ) | [protected, virtual] |
Reimplemented from vtkImageReader2.
| virtual void vtkBrukerFIDReader::ComputeDataIncrements | ( | ) | [protected, virtual] |
Reimplemented from vtkImageReader2.
| int vtkBrukerFIDReader::CreateOrderArrays | ( | ) | [protected] |
int vtkBrukerFIDReader::SortSlices [protected] |
Definition at line 284 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::SortYAxis [protected] |
Definition at line 285 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::SortZAxis [protected] |
Definition at line 286 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ReverseAlternateRows [protected] |
Definition at line 287 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ReverseAlternateColumns [protected] |
Definition at line 288 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::StandardKblockFormat [protected] |
Definition at line 289 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::RealDataExtent[12] [protected] |
Definition at line 296 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::RealModifiedDataExtent[12] [protected] |
Definition at line 300 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::RealDataIncrements[7] [protected] |
Definition at line 304 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::RealModifiedDataIncrements[7] [protected] |
Definition at line 305 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_dim [protected] |
Definition at line 310 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_size[3] [protected] |
Definition at line 311 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::NumSlices [protected] |
Definition at line 312 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::Nechoes [protected] |
Definition at line 313 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_n_echo_images [protected] |
Definition at line 314 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::NumRepetitions [protected] |
Definition at line 315 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::EchoPosition[3] [protected] |
Definition at line 316 of file vtkBrukerFIDReader.h.
char vtkBrukerFIDReader::Nucleus[9] [protected] |
Definition at line 317 of file vtkBrukerFIDReader.h.
double vtkBrukerFIDReader::BaseFrequency [protected] |
Definition at line 318 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_grad_matrixArraySize[3] [protected] |
Definition at line 321 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_grad_matrix [protected] |
Definition at line 322 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_obj_orderArraySize [protected] |
Definition at line 323 of file vtkBrukerFIDReader.h.
int* vtkBrukerFIDReader::ACQ_obj_order [protected] |
Definition at line 324 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_fovSize [protected] |
Definition at line 325 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_echo_time [protected] |
Definition at line 326 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_echo_timeArraySize [protected] |
Definition at line 327 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_repetition_time [protected] |
Definition at line 328 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_repetition_timeArraySize [protected] |
Definition at line 329 of file vtkBrukerFIDReader.h.
double vtkBrukerFIDReader::ACQ_fov[3] [protected] |
Definition at line 330 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_slice_sepn [protected] |
Definition at line 331 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_slice_sepnArraySize [protected] |
Definition at line 332 of file vtkBrukerFIDReader.h.
double vtkBrukerFIDReader::ACQ_slice_thick [protected] |
Definition at line 333 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_phase_factor [protected] |
Definition at line 334 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_rare_factor [protected] |
Definition at line 335 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_phase_encoding_size [protected] |
Definition at line 336 of file vtkBrukerFIDReader.h.
Definition at line 337 of file vtkBrukerFIDReader.h.
Definition at line 338 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_phase_enc_start [protected] |
Definition at line 339 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_phase_enc_start_array [protected] |
Definition at line 340 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_spatial_size1 [protected] |
Definition at line 341 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_spatial_phase1 [protected] |
Definition at line 342 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_spatial_size2 [protected] |
Definition at line 343 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_spatial_phase2 [protected] |
Definition at line 344 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_read_offset [protected] |
Definition at line 345 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_read_offsetArraySize [protected] |
Definition at line 346 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_phase1_offset [protected] |
Definition at line 347 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_phase1_offsetArraySize [protected] |
Definition at line 348 of file vtkBrukerFIDReader.h.
double* vtkBrukerFIDReader::ACQ_phase2_offset [protected] |
Definition at line 349 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ACQ_phase2_offsetArraySize [protected] |
Definition at line 350 of file vtkBrukerFIDReader.h.
int* vtkBrukerFIDReader::SliceOrder [protected] |
Definition at line 351 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::SliceOrderArraySize [protected] |
Definition at line 352 of file vtkBrukerFIDReader.h.
int* vtkBrukerFIDReader::YOrder [protected] |
Definition at line 353 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::YOrderArraySize [protected] |
Definition at line 354 of file vtkBrukerFIDReader.h.
int* vtkBrukerFIDReader::ZOrder [protected] |
Definition at line 355 of file vtkBrukerFIDReader.h.
int vtkBrukerFIDReader::ZOrderArraySize [protected] |
Definition at line 356 of file vtkBrukerFIDReader.h.
1.4.7