vtkBruker2DSEQReader Class Reference

#include <vtkBruker2DSEQReader.h>

Inheritance diagram for vtkBruker2DSEQReader:

[legend]Collaboration diagram for vtkBruker2DSEQReader:

[legend]List of all members.

---

Detailed Description

read Bruker MRI 2DSEQ image files

vtkBruker2DSEQReader is a source object that reads Bruker MRI 2DSEQ image files.

See also:

vtkImageReader2

Definition at line 56 of file vtkBruker2DSEQReader.h.

Public Member Functions
	vtkTypeRevisionMacro (vtkBruker2DSEQReader, vtkMedicalImageReader2)
virtual void	PrintSelf (ostream &os, vtkIndent indent)
virtual int	CanReadFile (const char *fname)
double *	GetACQ_echo_time ()
double *	GetACQ_repetition_time ()
double *	GetACQ_inversion_time ()
int *	GetImageBlockSliceIndex ()
virtual const char *	GetDescriptiveName ()
virtual int	GetNumSlices ()
virtual int	GetNechoes ()
virtual int	GetACQ_n_echo_images ()
virtual int	GetNumRepetitions ()
virtual char *	GetNucleus ()
virtual void	GetNucleus (char data[9])
virtual double *	GetRECO_fov ()
virtual void	GetRECO_fov (double &, double &, double &)
virtual void	GetRECO_fov (double[3])
virtual int *	GetRECO_size ()
virtual void	GetRECO_size (int &, int &, int &)
virtual void	GetRECO_size (int[3])
virtual RECO_TYPE	GetRECO_image_type ()
virtual double *	GetACQ_grad_matrixX ()
virtual void	GetACQ_grad_matrixX (double &, double &, double &)
virtual void	GetACQ_grad_matrixX (double[3])
virtual double *	GetACQ_grad_matrixY ()
virtual void	GetACQ_grad_matrixY (double &, double &, double &)
virtual void	GetACQ_grad_matrixY (double[3])
virtual double *	GetACQ_grad_matrixZ ()
virtual void	GetACQ_grad_matrixZ (double &, double &, double &)
virtual void	GetACQ_grad_matrixZ (double[3])
virtual int	GetACQ_echo_timeArraySize ()
virtual int	GetACQ_repetition_timeArraySize ()
virtual int	GetACQ_inversion_timeArraySize ()
virtual double	GetACQ_slice_thick ()
virtual void	SetSortByBlock (int)
virtual int	GetSortByBlock ()
virtual void	SortByBlockOn ()
virtual void	SortByBlockOff ()
Static Public Member Functions
static vtkBruker2DSEQReader *	New ()
Protected Member Functions
	vtkBruker2DSEQReader ()
	~vtkBruker2DSEQReader ()
virtual void	ExecuteInformation ()
virtual void	ExecuteData (vtkDataObject *out)
virtual void	ComputeDataIncrements ()
Protected Attributes
int	NumRepetitions
int	NumSlices
int	Nechoes
int	ACQ_n_echo_images
char	Nucleus [9]
double *	ACQ_echo_time
int	ACQ_echo_timeArraySize
double *	ACQ_repetition_time
int	ACQ_repetition_timeArraySize
double *	ACQ_inversion_time
int	ACQ_inversion_timeArraySize
double	ACQ_slice_thick
double *	ACQ_slice_sepn
int	ACQ_slice_sepnArraySize
double	RECO_fov [3]
int	RECO_size [3]
RECO_TYPE	RECO_image_type
double	ACQ_grad_matrixX [3]
double	ACQ_grad_matrixY [3]
double	ACQ_grad_matrixZ [3]
int	SortByBlock
int *	SliceIndex

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Constructor & Destructor Documentation

vtkBruker2DSEQReader::vtkBruker2DSEQReader

(

)

[protected]

vtkBruker2DSEQReader::~vtkBruker2DSEQReader

(

)

[protected]

---

Member Function Documentation

static vtkBruker2DSEQReader* vtkBruker2DSEQReader::New

(

)

[static]

Reimplemented from vtkMedicalImageReader2.

vtkBruker2DSEQReader::vtkTypeRevisionMacro	(	vtkBruker2DSEQReader	,
		vtkMedicalImageReader2
	)

virtual void vtkBruker2DSEQReader::PrintSelf	(	ostream &	os,
		vtkIndent	indent
	)			[virtual]

Reimplemented from vtkMedicalImageReader2.

virtual int vtkBruker2DSEQReader::CanReadFile

(

const char *

fname

)

[virtual]

virtual const char* vtkBruker2DSEQReader::GetDescriptiveName

(

)

[inline, virtual]

A descriptive name for this format

Reimplemented from vtkImageReader2.

Definition at line 67 of file vtkBruker2DSEQReader.h.

virtual int vtkBruker2DSEQReader::GetNumSlices

(

)

[virtual]

Get the number of slices.

virtual int vtkBruker2DSEQReader::GetNechoes

(

)

[virtual]

Get the number of echos per slice.

virtual int vtkBruker2DSEQReader::GetACQ_n_echo_images

(

)

[virtual]

Get the number of echo images (if exists).

virtual int vtkBruker2DSEQReader::GetNumRepetitions

(

)

[virtual]

Get the number of experiment repetitions.

virtual char* vtkBruker2DSEQReader::GetNucleus

(

)

[virtual]

Get the Nucleus type.

virtual void vtkBruker2DSEQReader::GetNucleus

(

char

data[9]

)

[virtual]

Get the Nucleus type.

virtual double* vtkBruker2DSEQReader::GetRECO_fov

(

)

[virtual]

Get the RECO_fov array.

virtual void vtkBruker2DSEQReader::GetRECO_fov	(	double &	,
		double &	,
		double &
	)			[virtual]

Get the RECO_fov array.

virtual void vtkBruker2DSEQReader::GetRECO_fov

(

double

[3]

)

[virtual]

Get the RECO_fov array.

virtual int* vtkBruker2DSEQReader::GetRECO_size

(

)

[virtual]

Get the RECO_size array.

virtual void vtkBruker2DSEQReader::GetRECO_size	(	int &	,
		int &	,
		int &
	)			[virtual]

Get the RECO_size array.

virtual void vtkBruker2DSEQReader::GetRECO_size

(

int

[3]

)

[virtual]

Get the RECO_size array.

virtual RECO_TYPE vtkBruker2DSEQReader::GetRECO_image_type

(

)

[virtual]

Get the RECO_image_type value.

virtual double* vtkBruker2DSEQReader::GetACQ_grad_matrixX

(

)

[virtual]

Get the ACQ_grad_matrixX array.

virtual void vtkBruker2DSEQReader::GetACQ_grad_matrixX	(	double &	,
		double &	,
		double &
	)			[virtual]

Get the ACQ_grad_matrixX array.

virtual void vtkBruker2DSEQReader::GetACQ_grad_matrixX

(

double

[3]

)

[virtual]

Get the ACQ_grad_matrixX array.

virtual double* vtkBruker2DSEQReader::GetACQ_grad_matrixY

(

)

[virtual]

Get the ACQ_grad_matrixY array.

virtual void vtkBruker2DSEQReader::GetACQ_grad_matrixY	(	double &	,
		double &	,
		double &
	)			[virtual]

Get the ACQ_grad_matrixY array.

virtual void vtkBruker2DSEQReader::GetACQ_grad_matrixY

(

double

[3]

)

[virtual]

Get the ACQ_grad_matrixY array.

virtual double* vtkBruker2DSEQReader::GetACQ_grad_matrixZ

(

)

[virtual]

Get the ACQ_grad_matrixZ array.

virtual void vtkBruker2DSEQReader::GetACQ_grad_matrixZ	(	double &	,
		double &	,
		double &
	)			[virtual]

Get the ACQ_grad_matrixZ array.

virtual void vtkBruker2DSEQReader::GetACQ_grad_matrixZ

(

double

[3]

)

[virtual]

Get the ACQ_grad_matrixZ array.

virtual int vtkBruker2DSEQReader::GetACQ_echo_timeArraySize

(

)

[virtual]

Get the ACQ_echo_time array size.

double* vtkBruker2DSEQReader::GetACQ_echo_time

(

)

[inline]

Get the ACQ_echo_time array.

Definition at line 134 of file vtkBruker2DSEQReader.h.

virtual int vtkBruker2DSEQReader::GetACQ_repetition_timeArraySize

(

)

[virtual]

Get the ACQ_repetition_time array size.

double* vtkBruker2DSEQReader::GetACQ_repetition_time

(

)

[inline]

Get the ACQ_repetition_time array.

Definition at line 142 of file vtkBruker2DSEQReader.h.

virtual int vtkBruker2DSEQReader::GetACQ_inversion_timeArraySize

(

)

[virtual]

Get the ACQ_inversion_time array size.

double* vtkBruker2DSEQReader::GetACQ_inversion_time

(

)

[inline]

Get the ACQ_inversion_time array.

Definition at line 150 of file vtkBruker2DSEQReader.h.

virtual double vtkBruker2DSEQReader::GetACQ_slice_thick

(

)

[virtual]

Get the ACQ_slice_thick value in mm.

virtual void vtkBruker2DSEQReader::SetSortByBlock

(

int

)

[virtual]

Set/Get whether to sort multi-echo images by image blocks.

virtual int vtkBruker2DSEQReader::GetSortByBlock

(

)

[virtual]

Set/Get whether to sort multi-echo images by image blocks.

virtual void vtkBruker2DSEQReader::SortByBlockOn

(

)

[virtual]

Set/Get whether to sort multi-echo images by image blocks.

virtual void vtkBruker2DSEQReader::SortByBlockOff

(

)

[virtual]

Set/Get whether to sort multi-echo images by image blocks.

int* vtkBruker2DSEQReader::GetImageBlockSliceIndex

(

)

[inline]

If this is a multi-echo experiment, returns the index of the images sorted by echo instead of slice.

Definition at line 167 of file vtkBruker2DSEQReader.h.

virtual void vtkBruker2DSEQReader::ExecuteInformation

(

)

[protected, virtual]

Reimplemented from vtkImageReader2.

virtual void vtkBruker2DSEQReader::ExecuteData

(

vtkDataObject *

out

)

[protected, virtual]

Reimplemented from vtkImageReader2.

virtual void vtkBruker2DSEQReader::ComputeDataIncrements

(

)

[protected, virtual]

Reimplemented from vtkImageReader2.

---

Member Data Documentation

int vtkBruker2DSEQReader::NumRepetitions [protected]

Definition at line 177 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::NumSlices [protected]

Definition at line 178 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::Nechoes [protected]

Definition at line 179 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::ACQ_n_echo_images [protected]

Definition at line 180 of file vtkBruker2DSEQReader.h.

char vtkBruker2DSEQReader::Nucleus[9] [protected]

Definition at line 181 of file vtkBruker2DSEQReader.h.

double* vtkBruker2DSEQReader::ACQ_echo_time [protected]

Definition at line 182 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::ACQ_echo_timeArraySize [protected]

Definition at line 183 of file vtkBruker2DSEQReader.h.

double* vtkBruker2DSEQReader::ACQ_repetition_time [protected]

Definition at line 184 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::ACQ_repetition_timeArraySize [protected]

Definition at line 185 of file vtkBruker2DSEQReader.h.

double* vtkBruker2DSEQReader::ACQ_inversion_time [protected]

Definition at line 186 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::ACQ_inversion_timeArraySize [protected]

Definition at line 187 of file vtkBruker2DSEQReader.h.

double vtkBruker2DSEQReader::ACQ_slice_thick [protected]

Definition at line 188 of file vtkBruker2DSEQReader.h.

double* vtkBruker2DSEQReader::ACQ_slice_sepn [protected]

Definition at line 189 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::ACQ_slice_sepnArraySize [protected]

Definition at line 190 of file vtkBruker2DSEQReader.h.

double vtkBruker2DSEQReader::RECO_fov[3] [protected]

Definition at line 191 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::RECO_size[3] [protected]

Definition at line 192 of file vtkBruker2DSEQReader.h.

RECO_TYPE vtkBruker2DSEQReader::RECO_image_type [protected]

Definition at line 193 of file vtkBruker2DSEQReader.h.

double vtkBruker2DSEQReader::ACQ_grad_matrixX[3] [protected]

Definition at line 194 of file vtkBruker2DSEQReader.h.

double vtkBruker2DSEQReader::ACQ_grad_matrixY[3] [protected]

Definition at line 195 of file vtkBruker2DSEQReader.h.

double vtkBruker2DSEQReader::ACQ_grad_matrixZ[3] [protected]

Definition at line 196 of file vtkBruker2DSEQReader.h.

int vtkBruker2DSEQReader::SortByBlock [protected]

Definition at line 197 of file vtkBruker2DSEQReader.h.

int* vtkBruker2DSEQReader::SliceIndex [protected]

Definition at line 198 of file vtkBruker2DSEQReader.h.

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The documentation for this class was generated from the following file:

• dox/IO/vtkBruker2DSEQReader.h

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